CDS

Accession Number TCMCG057C37375
gbkey CDS
Protein Id XP_018441212.1
Location complement(join(50290363..50290467,50290550..50290603,50290698..50290758,50290838..50291059,50291138..50291263,50291360..50291481,50291568..50291636,50291725..50291799,50291897..50292006,50292117..50292177,50292278..50292316,50292598..50292664,50292751..50292839,50292905..50293000,50293123..50293194,50293468..50293618,50293708..50293829,50293907..50294128,50294274..50294684))
Gene LOC108813219
GeneID 108813219
Organism Raphanus sativus

Protein

Length 757aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018585710.1
Definition PREDICTED: elongation factor G-1, mitochondrial [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category J
Description Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A- site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03012        [VIEW IN KEGG]
ko03029        [VIEW IN KEGG]
KEGG_ko ko:K02355        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000166        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003746        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003924        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005524        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006414        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008135        [VIEW IN EMBL-EBI]
GO:0008144        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010038        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0017076        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0030554        [VIEW IN EMBL-EBI]
GO:0032543        [VIEW IN EMBL-EBI]
GO:0032553        [VIEW IN EMBL-EBI]
GO:0032555        [VIEW IN EMBL-EBI]
GO:0032559        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0035639        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046686        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0070125        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097367        [VIEW IN EMBL-EBI]
GO:0140053        [VIEW IN EMBL-EBI]
GO:1901265        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCCGAGGTTCCCACCATCTCCGTCGCCTAACCACCTCCTGAGACTCTTCTCCTCCTCCAACAAACGCTCATCCTCGTCCTCTCCAACCGCCGCGCTTCTCTCCGGAGACTTCCATCTCCGCCAACAATTCTCCTCCGGGAACGCCGCCCGCGCGGCGAAAGGCGAGAAGGAGCCATGGTGGAAGGAGTCGATGAACAGGGTCCGCAACATCGGGATCTCGGCTCACATAGACTCGGGGAAAACCACGCTCACCGAGCGCGTGCTGTTCTACACGGGCCGGATCCACGAGATCCACGAAGTCAGAGGCAGAGACGGCGTCGGCGCCAAGATGGACTCCATGGACTTGGAGCGCGAGAAAGGTATCACCATCCAATCCGCCGCCACCTACTGTACCTGGAAGGATTACAAGGTTAATATAATCGACACTCCTGGTCACGTTGACTTCACTATTGAAGTGGAGAGAGCTTTGCGTGTGCTAGACGGTGCGATTCTAGTGCTGTGCAGTGTTGGTGGTGTGCAGAGTCAGTCTATTACTGTTGACAGGCAAATGAGGAGGTACGAGGTTCCGAGAGTCGCGTTTATCAACAAGCTCGATAGAATGGGAGCTGATCCTTGGAAAGTGTTGAGCCAAGCAAGAGCTAAGCTTCGACATCATAGTGCAGCTGTGCAAATGCCTATTGGTCTAGAAGAAAATTTCAAGGGTCTTATTGACCTTGTGCATTCGAAAGCTATTTTCTTCCATGGATCTAGCGGTGAGAATGTTGTGGCTGGTGATATCCCTGCTGATATGGAAGAGTTGGTTGCGGAGAAGAGGCGAGAATTGATAGAGACAGTCTCTGAAGTTGATGATGTGCTCGCTGAGAAGTTTCTGAATGATGAGCCTGTTACTGCTGCTGAGCTTGAGGAAGCTATTCGCAGAGCTACCATTGCACAGAAGTTTGTTCCTGTATTTATGGGCAGTGCATTCAAAAACAAGGGAGTACAACCTCTACTTGATGGTGTTCTTAGCTATCTTCCTTGTCCAACTGAAGTCAATAACTATGCTCTTGACCAGAATAATGAGGAAGAGAAGGTAACCTTGACCGGTTCTCCAGATGGACCTCTTGTTGCGTTGGCTTTTAAACTAGAGGAGGGACGTTTTGGTCAGCTAACATATCTAAGGATATACGAAGGCGTGATTAAGAAGGGTGATTTTATCATAAATGTTAATACTAAAAAGAGAATAAAGGTCCCACGCTTGGTCCGTATGCATTCTAATGATATGGAGGATATTCAAGAGGCACATGCTGGGGAAATCGTAGCTGTGTTTGGTGTTGATTGTGCATCAGGTGATACGTTTACCGATGGATCAGTGAGGTACACAATGACATCGATGAGTGTTCCTGAACCTGTTATGTCCTTGGCTGTTCAACCAGTTTCAAAAGATTCTGGTGGACAGTTCTCGAAAGCATTGAGCCGGTTCACGAGAGAGGATCCTACTTTCAGAGTGGGATTGGATCCCGAGAGTAACCAGACGATTATCTCTGGTATGGGGGAATTGCATTTGGACATTTATATTGAGCGTATGCGGAGAGAATACAAGGTTGATGCGACTGTCGGCAAACCCCGTGTCAACTTTAGGGAGACTATTACTCAGCGGGCTGAGTTTGATTATCTACACAAGAAGCAGAGTGGAGGAGCAGGTCAGTACGGTAGGGTTACAGGGTATGTGGAACCTCTACCAGCTGACTCTAAAGAGAAGTTTGAGTTCGAAAACATGATTGTTGGACAAGCGATTCCGTCTGGTTTTATACCAGCAATCGAGAAAGGTTTCAAAGAAGCTGCAAACTCGGGATCACTAATTGGTCATCCGGTTGAGAATATTCGGATAGTATTGACAGATGGAGCTTCACACGCCGTAGATTCCAGTGAACTTGCGTTTAAGATGGCTGCAATATACGCGTTTAGACTGTGTTACACAGCGGCTAAACCGGTGATTCTAGAGCCTGTCATGTTGGTTGAGTTGAAAGTACCAACAGAGTTTCAGGGCACTGTTGCTGGTGACATCAACAAGAGGAAAGGTATAATCGTTGGAAACGATCAAGAGGGTGATGATTCAGTAATCCAAGCTCATGTGCCTTTGAACAACATGTTTGGCTATTCCACATCTCTCCGCTCCATGACACAGGGAAAAGGAGAATTTACGATGGAATACAAAGAACACTGTGCTGTGTCAAACGATGTCCAGACTCAGCTCGTCAACGCCCACAACGCCACCAAAGCAACTGATTAA
Protein:  
MPRFPPSPSPNHLLRLFSSSNKRSSSSSPTAALLSGDFHLRQQFSSGNAARAAKGEKEPWWKESMNRVRNIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRVAFINKLDRMGADPWKVLSQARAKLRHHSAAVQMPIGLEENFKGLIDLVHSKAIFFHGSSGENVVAGDIPADMEELVAEKRRELIETVSEVDDVLAEKFLNDEPVTAAELEEAIRRATIAQKFVPVFMGSAFKNKGVQPLLDGVLSYLPCPTEVNNYALDQNNEEEKVTLTGSPDGPLVALAFKLEEGRFGQLTYLRIYEGVIKKGDFIINVNTKKRIKVPRLVRMHSNDMEDIQEAHAGEIVAVFGVDCASGDTFTDGSVRYTMTSMSVPEPVMSLAVQPVSKDSGGQFSKALSRFTREDPTFRVGLDPESNQTIISGMGELHLDIYIERMRREYKVDATVGKPRVNFRETITQRAEFDYLHKKQSGGAGQYGRVTGYVEPLPADSKEKFEFENMIVGQAIPSGFIPAIEKGFKEAANSGSLIGHPVENIRIVLTDGASHAVDSSELAFKMAAIYAFRLCYTAAKPVILEPVMLVELKVPTEFQGTVAGDINKRKGIIVGNDQEGDDSVIQAHVPLNNMFGYSTSLRSMTQGKGEFTMEYKEHCAVSNDVQTQLVNAHNATKATD